![]() TYNA (TopNet-like Yale Network Analyzer), a Web system for managing, comparing and mining multiple networks, both directed and undirected. QPCR: Application for real-time PCR data management and analysis.īMC Bioinformatics 2009, 10:268 Posted on 8 Categories PCR / Primer Design Tags Analyze, Manage, qPCR, qPCR Experiments, Store Leave a comment on QPCR 1.0 – Store, Manage, and Analyze data from qPCR Experiments tYNA – Tool for Managing, Comparing and Mining Multiple Networks Pabinger S, Thallinger GG, Snajder R, Eichhorn H, Rader R, Trajanoski Z. Genomics & Bioinformatics Graz, Graz University of Technology ![]() Results can be visualized in highly customizable charts and exported for further investigation. Moreover, the application supports proper error propagation throughout all analysis steps and allows conducting statistical tests on sample classes. The analysis pipeline includes technical and biological replicate handling, incorporates sample or gene specific efficiency, normalization using single or multiple housekeeping genes, inter-run calibration, and fold change calculation. It comprises a parser to automatically import generated data from qPCR devices and includes a variety of analysis methods to calculate Ct and amplification efficiency values. QPCR is a versatile web-based Java application that allows to store, manage, and analyze data from quantitative real-time polymerase chain reaction (qPCR) experiments. Posted on 5 5 Categories Miscellaneous Tags COMPONENT, Djeen, Joomla!, Manage, Scientific Data QPCR 1.0 – Store, Manage, and Analyze data from qPCR Experiments Stahl O, Duvergey H, Guille A, Blondin F, Vecchio AD, Finetti P, Granjeaud S, Vigy O, Bidaut G. doi: 10.1186/1756-3.ĭjeen (Database for Joomla!’s Extensible Engine): a research information management system for flexible multi-technology project administration. Advanced permissions are managed through different roles.īMC Res Notes. Its database model, kept simple, is compliant with most technologies and allows storing and managing of heterogeneous data with the same system. It is a user-friendly application, designed to streamline data storage and annotation collaboratively. “ DECIPHER: A Search-Based Approach to Chimera Identification for 16S rRNA Sequences.”Īpplied and Environmental Microbiology, Posted on 4 4 Categories DNA / Genome Analysis Tags DECIPHER, DesignSignatures, DNA Sequence, Manage Leave a comment on DECIPHER 2.20.0 – Decipher & Manage DNA Sequences Djeen 1.5.1 – A Joomla! Component to Manage Scientific dataĭjeen (Database for Joomla!’s Extensible Engine) is a Joomla! component to manage an external database and file storing for experimental data. The program is designed to be used with non-destructive workflows that guide the user through the process of importing, maintaining, analyzing, manipulating, and exporting a massive amount of DNA sequences.ĭesignSignatures: a tool for designing primers that yield amplicons with distinct signatures. DECIPHER (Database Enabled Code for Ideal Probe Hybridization Employing R) is a software toolset that can be used for deciphering and managing DNA sequences efficiently using the R statistical programming language.
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